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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904354.1_cds_XP_016454492.1_48513
CDS Infomation

[gene=LOC107778720] [db_xref=GeneID:107778720] [protein=pectin acetylesterase 8-like] [protein_id=XP_016454492.1] [location=join(29057..29192,29291..29373,29789..29918,30041..30120,30255..30341,30625..30749,30843..30903,31203..31256,31347..31424,31902..31983,34601..34740,35410..35514)] [gbkey=CDS]
Sequence

ATGGCGGCAAGAACTCTTCATCTTTTTTGCTTTCTTGTTTGTTCTTTGGCCATCATCAAA
TCTGAATGTGCAAAAGACTTAGGTTCTTACAATGTGACGAAGACAATCCTTAAGAATGCT
GTGTCAAAAGGAGCAGTATGTTTGGATGGATCACCTCCAGCATACCATTTTGAACCTGGA
TTTGGCAAAGGAGTTGGAAATTGGATTGTACAACTTTCGGGAGGAGCATGGTGCACAAAC
GTCACAGAATGCCAGGATCGTATTTTGGACAAGAACGTGGGTTCTACAAATTTTACGGAT
TCATGGACGTTTCAAGGAATTTATAGCGAGAATCCGACTGCAAATCCAGATTTCTACAAT
TGGAACAAAGTGTTTGTTAGATACTGTGATGGTGGAGCGTTCACCGGAGATGTTGAATAC
GTTGATCATGTTACTAATCTTCACTTCAGAGGCGCGAGGATTTTTGAAGCAGTAATGGAG
GATTTGTTGGCAAAAGGATTAAAGAATGCCAAAAATGCTATTCTTGCAGGAAGTTCAGCC
GGAGGATATCCAACAATGCTATATTGCGATCACTTCCGCAGTTTATTGCCAAATACTCCT
AGAGTGAAATGCTTAGTCGATTCTGGTTACTTTATCCATGTGAAGAACCCTATGCAAGCA
AGTGGCTTCGAGAAAATTTATAACTCACTTCTGACTTTACATGGATCTACAAAAGCACTA
CCCAAATCATGCACTTCAAAAATGAATCCACCATTGTGTTTCTTCCCAGAAAACATGCAA
CAACATATCAAGACACCACTTTTCATTGCGATGTCAGCATTTGATTATTATCAGATCAAA
ACTACTATAGACCCTAATGCAGACCGATGCGTTGAAAACAGGACATGCACCGAGTGTCAA
AACAAAGCCTTCAGAGAATTTAGGTCGGAATTCTTAAGTGCTCTGCCCATATCAAACAAT
CCTAAATTGAGAGGAGTTTTCATTGACTCAGTAATTCATCATTCAGCGCTATCATATAGG
TGGACTCCTGAAAACGCCATTCTGATTAATAACCTGTCTGCACCGAAGGCATTTGCTGAT
TGGTACTTCGATCGAAAGTACTGGTATGTGATAGATAAGCATGACCTGCCAATCCCTACA
ACAAAAGACCGCAGGACATAA

Peptide Sequence

PEP ID

XP_016454492.1
PEP Infomation

PREDICTED: pectin acetylesterase 8-like [Nicotiana tabacum]
Sequence

MAARTLHLFCFLVCSLAIIKSECAKDLGSYNVTKTILKNAVSKGAVCLDGSPPAYHFEPG
FGKGVGNWIVQLSGGAWCTNVTECQDRILDKNVGSTNFTDSWTFQGIYSENPTANPDFYN
WNKVFVRYCDGGAFTGDVEYVDHVTNLHFRGARIFEAVMEDLLAKGLKNAKNAILAGSSA
GGYPTMLYCDHFRSLLPNTPRVKCLVDSGYFIHVKNPMQASGFEKIYNSLLTLHGSTKAL
PKSCTSKMNPPLCFFPENMQQHIKTPLFIAMSAFDYYQIKTTIDPNADRCVENRTCTECQ
NKAFREFRSEFLSALPISNNPKLRGVFIDSVIHHSALSYRWTPENAILINNLSAPKAFAD
WYFDRKYWYVIDKHDLPIPTTKDRRT

Transcript Sequence

Gene sequence data has not been registered.